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  5. XM_002500434.1

XM_002500434.1 (MICPUN_79594, 79594)


Aliases : MICPUN_79594, 79594

Description : S1 domain; K Homology domain, type 1; Exoribonuclease, phosphorolytic domain 2; Exoribonuclease, phosphorolytic domain 1 [Interproscan].


Gene families : OG_01_0000856 (OrthoFinder) Phylogenetic Tree(s): OG0000856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500434.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021073.40 tig00021073_g18049.t1 RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59471.1_6229 PRW59471 Polyribonucleotide nucleotidyltransferase mitochondrial 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Enrichment
MF GO:0050043 lactate racemase activity IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 195 259
IPR004088 KH_dom_type_1 653 700
IPR001247 ExoRNase_PH_dom1 417 549
IPR001247 ExoRNase_PH_dom1 62 191
IPR003029 S1_domain 725 787
No external refs found!