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Aliases : MICPUN_56849, 56849
Description : RNA binding protein
Gene families : OG_01_0000163 (OrthoFinder) Phylogenetic Tree(s): OG0000163_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002500423.1 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre04.g216650 | 30791026 | No description available | 0.03 | OrthoFinder | |
| Cre07.g352650 | 30775322 | No description available | 0.03 | OrthoFinder | |
| Cre09.g391949 | 30781196 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder | |
| Cre12.g549100 | 30792472 | No description available | 0.02 | OrthoFinder | |
| Sro4_g003060.1 | Contig3815.g29224 | Splicing factor U2af large subunit | 0.01 | OrthoFinder | |
| Sro760_g198350.1 | Contig3371.g26396 | U2AF 65 kDa subunit | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Enrichment |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Enrichment |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
| BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
| MF | GO:0010181 | FMN binding | IEP | Enrichment |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| No external refs found! |