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  5. Cpa|evm.model.tig00021759.12

Cpa|evm.model.tig00021759.12 (tig00021759_g23426.t1)


Aliases : tig00021759_g23426.t1

No description available


Gene families : OG_01_0004477 (OrthoFinder) Phylogenetic Tree(s): OG0004477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021759.12
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cre08.g382300 30773983, CCB4 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder
PTI_13G00480.1 No alias Cofactor assembly of complex C subunit B, CCB2/CCB4... 0.02 OrthoFinder
lcl|VRMN01000027.1_cds_KAA8490444.1_2875 KAA8490444 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR021325 CCB2/CCB4 193 234
IPR021325 CCB2/CCB4 71 174
No external refs found!