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  5. XM_002500239.1

XM_002500239.1 (MICPUN_55721, 55721)


Aliases : MICPUN_55721, 55721

Description : Nucleoporin Nup186/Nup192/Nup205 [Interproscan].


Gene families : OG_01_0004564 (OrthoFinder) Phylogenetic Tree(s): OG0004564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500239.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre13.g578100 30784397 No description available 0.07 OrthoFinder
Cz08g21070.t1 No alias Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.06 OrthoFinder
Dusal.0102s00015.1 33190557 Hypothetical protein 0.02 OrthoFinder
Dusal.0102s00017.1 33190551 Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55118 55118 Nucleoporin Nup186/Nup192/Nup205 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
InterPro domains Description Start Stop
IPR021827 Nup186/Nup192/Nup205 11 114
IPR021827 Nup186/Nup192/Nup205 855 1554
No external refs found!