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  5. XM_002500152.1

XM_002500152.1 (MICPUN_55886, 55886)


Aliases : MICPUN_55886, 55886

Description : Transcription factor TFIID with WD40 repeat


Gene families : OG_01_0003119 (OrthoFinder) Phylogenetic Tree(s): OG0003119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500152.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cre12.g526950 30792530 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR007582 TFIID_NTD2 63 191
IPR006594 LisH 7 31
IPR001680 WD40_repeat 372 405
IPR001680 WD40_repeat 605 643
IPR001680 WD40_repeat 484 517
IPR001680 WD40_repeat 648 686
IPR001680 WD40_repeat 564 601
IPR001680 WD40_repeat 523 558
No external refs found!