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  5. XM_002500104.1

XM_002500104.1 (MICPUN_98844, 98844)


Aliases : MICPUN_98844, 98844

Description : CCR4-NOT transcription complex subunit 1, TTP binding domain; CCR4-Not complex component, Not1, C-terminal; CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819; CCR4-NOT transcription complex subunit 1, CAF1-binding domain; CCR4-NOT transcription complex subunit 1, HEAT repeat [Interproscan].


Gene families : OG_01_0002549 (OrthoFinder) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500104.1

Target Alias Description ECC score Gene Family Method Actions
Cz07g24160.t1 No alias CCR4-NOT transcription complex subunit 1, TTP binding... 0.03 OrthoFinder
EOD36722 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR032191 CNOT1_CAF1_bind 758 977
IPR032193 CNOT1_TTP_bind 472 626
IPR024557 CCR4-Not_Not1su_DUF3819 1074 1218
IPR032194 CNOT1_HEAT 272 416
IPR007196 CCR4-Not_Not1_C 1730 2090
No external refs found!