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  5. XM_002500052.1

XM_002500052.1 (MICPUN_107741, 107741)


Aliases : MICPUN_107741, 107741

Description : Thylakoid lumenal 25.6kDa protein like, chloroplast precursor


Gene families : OG_01_0004166 (OrthoFinder) Phylogenetic Tree(s): OG0004166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500052.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001408.6 tig00001408_g8601.t1 No description available 0.01 OrthoFinder
Cre12.g509050 30791680, PSBP3 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder
Cz02g18040.t1 No alias PsbP, C-terminal [Interproscan]. 0.07 OrthoFinder
OT_07G02400.1 No alias PsbP, C-terminal [Interproscan]. 0.03 OrthoFinder
PTI_17G01030.1 No alias PsbP, C-terminal [Interproscan]. 0.07 OrthoFinder
Sro204_g085790.1 Contig1096.g10609 PsbP-like protein 0.05 OrthoFinder
Transcript_contig_59339 59339 PsbP, C-terminal [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0221.1 32898000 PsbP, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_003057786.1 MicpuC2_57449, 57449 PsbP, C-terminal [Interproscan]. 0.11 OrthoFinder
lcl|BLLF01000477.1_cds_GFH12203.1_6680 HaLaN_07842, GFH12203 Chloroplast oxygen-evolving complex/thylakoid lumenal... 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44867.1_1794 PRW44867 PsbP chloroplastic 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491803.1_4811 KAA8491803 PsbP-like protein 1, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR002683 PsbP_C 71 220
No external refs found!