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  5. XM_002500035.1

XM_002500035.1 (MICPUN_56116, 56116)


Aliases : MICPUN_56116, 56116

Description : Translation elongation factor EFG/EF2, domain IV; Transcription factor, GTP-binding domain; Elongation Factor G, domain II; Elongation factor EFG, domain V-like; Translation elongation factor EFTu-like, domain 2 [Interproscan].


Gene families : OG_01_0000545 (OrthoFinder) Phylogenetic Tree(s): OG0000545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002500035.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cz11g15050.t1 No alias Translation elongation factor EFTu-like, domain 2;... 0.05 OrthoFinder
EOD36065 No alias Putative mitochondrial elongation factor [Ensembl]. 0.02 OrthoFinder
EOD38386 No alias Putative mitochondrial elongation factor [Ensembl]. 0.02 OrthoFinder
OT_07G04640.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.06 OrthoFinder
Sro29_g019050.1 Contig1384.g12748 Factor G 0.01 OrthoFinder
Transcript_contig_56653 56653 Translation elongation factor EFTu-like, domain 2;... 0.01 OrthoFinder
Vocar.0001s1598.1 32885379 Elongation factor EFG, domain V-like; Translation... 0.01 OrthoFinder
lcl|BLLF01001080.1_cds_GFH16986.1_11463 HaLaN_13516, GFH16986 Elongation factor G1 0.03 OrthoFinder
lcl|BLLF01002476.1_cds_GFH24222.1_18699 HaLaN_21973, GFH24222 Elongation factor G, chloroplastic 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493598.1_4360 KAA8493598 Elongation factor G 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005517 Transl_elong_EFG/EF2_IV 621 739
IPR041095 EFG_II 546 619
IPR004161 EFTu-like_2 466 533
IPR000640 EFG_V-like 743 829
IPR000795 T_Tr_GTP-bd_dom 151 422
No external refs found!