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  5. XM_002499910.1

XM_002499910.1 (MICPUN_78980, 78980)


Aliases : MICPUN_78980, 78980

Description : GTP-binding protein OBG, C-terminal; GTP binding domain; GTP1/OBG domain [Interproscan].


Gene families : OG_01_0000470 (OrthoFinder) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002499910.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre09.g395600 30780716 Probable GTP-binding protein OBGC2 OS=Oryza sativa... 0.05 OrthoFinder
Cre10.g433100 30789840 Probable GTP-binding protein OBGC1, chloroplastic... 0.11 OrthoFinder
Cz02g10010.t1 No alias GTP1/OBG domain; GTP binding domain [Interproscan]. 0.03 OrthoFinder
Cz10g16250.t1 No alias GTP1/OBG domain; GTP binding domain; GTP-binding protein... 0.02 OrthoFinder
Dusal.0341s00003.1 33193241 GTP-binding protein OBG, C-terminal; GTP binding domain;... 0.05 OrthoFinder
OT_03G03140.1 No alias GTP-binding protein OBG, C-terminal; GTP binding domain;... 0.03 OrthoFinder
OT_07G04130.1 No alias GTP binding domain; GTP1/OBG domain [Interproscan]. 0.09 OrthoFinder
Transcript_contig_57944 57944 GTP binding domain; GTP1/OBG domain [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0174.1 32897045 GTP binding domain; GTP1/OBG domain [Interproscan]. 0.05 OrthoFinder
Vocar.0014s0145.1 32888483 GTP binding domain; GTP-binding protein OBG, C-terminal;... 0.02 OrthoFinder
XM_003055157.1 MicpuC2_43864, 43864 GTP-binding protein OBG, C-terminal; GTP binding domain;... 0.04 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491832.1_4840 KAA8491832 GTPase Obg 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006169 GTP1_OBG_dom 5 157
IPR006073 GTP-bd 161 280
IPR015349 OCT_dom 361 428
No external refs found!