1. Home
  2. Species
  3. Micromonas commoda
  4. Sequence
  5. XM_002499639.1

XM_002499639.1 (MICPUN_54017, 54017)


Aliases : MICPUN_54017, 54017

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002499639.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
OT_06G04070.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_04G01780.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_21G01960.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro2009_g310720.1 Contig340.g4632 Protein ligase Arkadia 0.02 OrthoFinder
Transcript_contig_1388 1388 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 219 267
No external refs found!