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  5. XM_002499556.1

XM_002499556.1 (MICPUN_78842, 78842)


Aliases : MICPUN_78842, 78842

Description : Anticodon-binding; WHEP-TRS domain; Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [Interproscan].


Gene families : OG_01_0002441 (OrthoFinder) Phylogenetic Tree(s): OG0002441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002499556.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cz13g19120.t1 No alias Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [Interproscan]. 0.03 OrthoFinder
EOD37663 No alias Glycyl-tRNA synthetase [Ensembl]. 0.03 OrthoFinder
OT_07G02860.1 No alias Anticodon-binding; Aminoacyl-tRNA synthetase, class II... 0.04 OrthoFinder
PTI_06G03730.1 No alias WHEP-TRS domain; Anticodon-binding [Interproscan]. 0.02 OrthoFinder
Sro756_g197850.1 Contig3619.g28001 Glycine--tRNA ligase (Fragment) 0.06 OrthoFinder
Transcript_contig_54589 54589 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56256.1_9956 PRW56256 Glycyl-tRNA synthetase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499972.1_8925 KAA8499972 Glycine--tRNA ligase, mitochondrial 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR004154 Anticodon-bd 556 647
IPR000738 WHEP-TRS_dom 2 40
IPR002314 aa-tRNA-synt_IIb 235 318
No external refs found!