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  5. Cpa|evm.model.tig00021720.13

Cpa|evm.model.tig00021720.13 (tig00021720_g23183.t1)


Aliases : tig00021720_g23183.t1

Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021720.13
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre03.g178150 30788235, CAM1 Calmodulin OS=Chlamydomonas reinhardtii 0.02 OrthoFinder
Cz01g28170.t1 No alias EF-hand domain [Interproscan]. 0.03 OrthoFinder
Cz03g08160.t1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Cz14g12250.t1 No alias EF-hand domain pair; EF-hand domain [Interproscan]. 0.02 OrthoFinder
Dusal.0080s00002.1 33203946 EF-hand domain [Interproscan]. 0.04 OrthoFinder
Dusal.0281s00002.1 33190362 EF-hand domain [Interproscan]. 0.06 OrthoFinder
Dusal.0372s00008.1 33200478 EF-hand domain [Interproscan]. 0.01 OrthoFinder
EOD09660 No alias Centrin [Ensembl]. 0.01 OrthoFinder
EOD14806 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
Sro426_g140290.1 Contig1720.g15374 Putative calmodulin-like protein 0.03 OrthoFinder
SymbC1.scaffold6405.5 6405.5 EF-hand domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_57615 57615 EF-hand domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_59375 59375 EF-hand domain pair; EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0012s0203.1 32894916 EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0015s0348.1 32899204 EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0015s0353.1 32898853 EF-hand domain [Interproscan]. 0.02 OrthoFinder
Vocar.0019s0206.1 32892735 EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_003055480.1 MicpuC2_11510, 11510 EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_003056806.1 MicpuC2_49514, 49514 Caltractin 0.03 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50910.1_763 PRW50910 Putative calcium-binding CML20 0.01 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20359.1_5525 PRW20359 Centrin 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497936.1_6889 KAA8497936 Calmodulin 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0031144 proteasome localization IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 499 562
IPR002048 EF_hand_dom 426 488
No external refs found!