lcl|BLLF01005829.1_cds_GFH31682.1_26159 (HaLaN_30771, GFH31682)


Aliases : HaLaN_30771, GFH31682

Description : U3 small nucleolar RNA-associated 14-like protein A


Gene families : OG_01_0001582 (OrthoFinder) Phylogenetic Tree(s): OG0001582_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01005829.1_cds_GFH31682.1_26159
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.20 tig00020554_g10806.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cpa|evm.model.tig00020554.21 tig00020554_g10806.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre11.g478950 30775827 Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 OrthoFinder
Cz02g05190.t1 No alias Utp14 protein [Interproscan]. 0.05 OrthoFinder
Dusal.0072s00013.1 33199054 Utp14 protein [Interproscan]. 0.03 OrthoFinder
EOD14154 No alias Utp14 protein [Interproscan]. 0.06 OrthoFinder
EOD34678 No alias Utp14 protein [Interproscan]. 0.03 OrthoFinder
OT_04G00780.1 No alias Utp14 protein [Interproscan]. 0.07 OrthoFinder
PTI_28G00410.1 No alias Utp14 protein [Interproscan]. 0.08 OrthoFinder
Sro54_g031940.1 Contig2430.g19882 Associated protein 14 homolog A 0.08 OrthoFinder
TP02G07320.1 No alias Utp14 protein [Interproscan]. 0.05 OrthoFinder
Transcript_contig_55120 55120 Utp14 protein [Interproscan]. 0.05 OrthoFinder
Transcript_contig_70128 70128 Hypothetical protein 0.04 OrthoFinder
Vocar.0027s0003.1 32887208 Utp14 protein [Interproscan]. 0.04 OrthoFinder
XM_002504361.1 MICPUN_102467, 102467 Utp14 protein [Interproscan]. 0.05 OrthoFinder
XM_003064738.1 MicpuC2_43608, 43608 Utp14 protein [Interproscan]. 0.08 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50835.1_983 PRW50835 U3 small nucleolar RNA-associated 14-like protein A 0.07 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496059.1_2057 KAA8496059 U3 small nucleolar RNA-associated protein 14-like A 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!