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  5. Cpa|evm.model.tig00021680.25

Cpa|evm.model.tig00021680.25 (tig00021680_g23046.t1)


Aliases : tig00021680_g23046.t1

Description : WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana


Gene families : OG_01_0001975 (OrthoFinder) Phylogenetic Tree(s): OG0001975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021680.25
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527500 30791797 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.01 OrthoFinder
EOD25596 No alias WD40 repeat; LIS1 homology motif [Interproscan]. 0.01 OrthoFinder
OT_11G00830.1 No alias LIS1 homology motif; WD40 repeat [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45142.1_1959 PRW45142 F-box-like WD repeat-containing TBL1XR1 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494293.1_4157 KAA8494293 F-box-like/WD repeat-containing protein TBL1XR1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019107 myristoyltransferase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 304 340
IPR001680 WD40_repeat 180 206
IPR001680 WD40_repeat 351 396
IPR001680 WD40_repeat 211 248
IPR006594 LisH 7 33
No external refs found!