- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HaLaN_30250, GFH31249
Description : Transmembrane 9 superfamily member
Gene families : OG_01_0000721 (OrthoFinder) Phylogenetic Tree(s): OG0000721_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01005479.1_cds_GFH31249.1_25726 | |
| Cluster | HCCA: Cluster_144 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g024350 | 30789351 | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre14.g611850 | 30776730 | Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre16.g675958 | 30778074 | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cz07g20050.t1 | No alias | Nonaspanin (TM9SF) [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0053s00022.1 | 33186580 | Nonaspanin (TM9SF) [Interproscan]. | 0.02 | OrthoFinder | |
| EOD16544 | No alias | Nonaspanin (TM9SF) [Interproscan]. | 0.01 | OrthoFinder | |
| EOD20112 | No alias | Nonaspanin (TM9SF) [Interproscan]. | 0.01 | OrthoFinder | |
| PTI_04G05070.1 | No alias | Nonaspanin (TM9SF) [Interproscan]. | 0.01 | OrthoFinder | |
| TP05G08660.1 | No alias | Nonaspanin (TM9SF) [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_53923 | 53923 | Nonaspanin (TM9SF) [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_54473 | 54473 | Nonaspanin (TM9SF) [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59993.1_6709 | PRW59993 | Transmembrane 9 superfamily member 1 | 0.02 | OrthoFinder | |
| lcl|LHPG02000026.1_cds_PRW18303.1_5817 | PRW18303 | Phagocytic receptor 1b | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004240 | EMP70 | 2 | 197 |
| No external refs found! |