Aliases : HaLaN_30009, GFH31049
Description : Ribosomal_S17_N domain-containing protein
Gene families : OG_01_0003480 (OrthoFinder) Phylogenetic Tree(s): OG0003480_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01005325.1_cds_GFH31049.1_25526 | |
Cluster | HCCA: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000551.22 | tig00000551_g2043.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder | |
Cre12.g514500 | 30792578, RPS11 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.12 | OrthoFinder | |
Cz02g12020.t1 | No alias | Ribosomal protein S17/S11; 40S ribosomal protein S11,... | 0.09 | OrthoFinder | |
Dusal.0778s00006.1 | 33199653 | Ribosomal protein S17/S11; 40S ribosomal protein S11,... | 0.03 | OrthoFinder | |
EOD05251 | No alias | Ribosomal protein S17/S11; 40S ribosomal protein S11,... | 0.12 | OrthoFinder | |
OT_06G01520.1 | No alias | 40S ribosomal protein S11, N-terminal; Ribosomal protein... | 0.15 | OrthoFinder | |
PTI_12G03740.1 | No alias | Ribosomal protein S17/S11; 40S ribosomal protein S11,... | 0.07 | OrthoFinder | |
Sro154_g070110.1 | Contig2716.g21889 | 40S ribosomal protein S11 | 0.11 | OrthoFinder | |
TP05G00420.1 | No alias | Ribosomal protein S17/S11; 40S ribosomal protein S11,... | 0.11 | OrthoFinder | |
Vocar.0006s0303.1 | 32893913 | Ribosomal protein S17/S11; 40S ribosomal protein S11,... | 0.04 | OrthoFinder | |
XM_002501400.1 | MICPUN_81184, 81184 | Ribosomal protein | 0.07 | OrthoFinder | |
XM_003059434.1 | MicpuC2_33883, 33883 | Ribosomal protein S17/S11; 40S ribosomal protein S11,... | 0.05 | OrthoFinder | |
lcl|LHPG02000001.1_cds_PRW61173.1_440 | PRW61173 | 40S ribosomal S11 | 0.08 | OrthoFinder | |
lcl|VRMN01000015.1_cds_KAA8491213.1_5841 | KAA8491213 | 40S ribosomal protein S11 | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
BP | GO:0006413 | translational initiation | IEP | Enrichment |
BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
MF | GO:0008685 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | IEP | Enrichment |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
MF | GO:0051920 | peroxiredoxin activity | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
No external refs found! |