lcl|BLLF01005325.1_cds_GFH31049.1_25526 (HaLaN_30009, GFH31049)


Aliases : HaLaN_30009, GFH31049

Description : Ribosomal_S17_N domain-containing protein


Gene families : OG_01_0003480 (OrthoFinder) Phylogenetic Tree(s): OG0003480_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01005325.1_cds_GFH31049.1_25526
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000551.22 tig00000551_g2043.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 OrthoFinder
Cre12.g514500 30792578, RPS11 Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 OrthoFinder
Cz02g12020.t1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.09 OrthoFinder
Dusal.0778s00006.1 33199653 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.03 OrthoFinder
EOD05251 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.12 OrthoFinder
OT_06G01520.1 No alias 40S ribosomal protein S11, N-terminal; Ribosomal protein... 0.15 OrthoFinder
PTI_12G03740.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.07 OrthoFinder
Sro154_g070110.1 Contig2716.g21889 40S ribosomal protein S11 0.11 OrthoFinder
TP05G00420.1 No alias Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.11 OrthoFinder
Vocar.0006s0303.1 32893913 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.04 OrthoFinder
XM_002501400.1 MICPUN_81184, 81184 Ribosomal protein 0.07 OrthoFinder
XM_003059434.1 MicpuC2_33883, 33883 Ribosomal protein S17/S11; 40S ribosomal protein S11,... 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61173.1_440 PRW61173 40S ribosomal S11 0.08 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491213.1_5841 KAA8491213 40S ribosomal protein S11 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR032440 Ribosomal_S11_N 30 97
IPR000266 Ribosomal_S17/S11 99 157
No external refs found!