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  5. lcl|BLLF01005212.1_cds_GFH30884.1_25361

lcl|BLLF01005212.1_cds_GFH30884.1_25361 (HaLaN_29814, GFH30884)


Aliases : HaLaN_29814, GFH30884

Description : RNA helicase


Gene families : OG_01_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01005212.1_cds_GFH30884.1_25361
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000796.23 tig00000796_g4246.t1 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder
Cre11.g467654 30775609 Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 OrthoFinder
Dusal.0003s00057.1 33187539 Helicase, C-terminal; Domain of unknown function... 0.03 OrthoFinder
Dusal.0072s00015.1 33199066 Helicase-associated domain; Helicase, C-terminal; Domain... 0.01 OrthoFinder
Dusal.0244s00011.1 33186504 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.04 OrthoFinder
EOD29635 No alias ATP-dependent RNA helicase [Ensembl]. 0.02 OrthoFinder
OT_14G00410.1 No alias Helicase-associated domain; Helicase, C-terminal; Domain... 0.02 OrthoFinder
SymbC1.scaffold4319.1 4319.1 DEAD/DEAH box helicase domain; Domain of unknown... 0.01 OrthoFinder
Vocar.0005s0082.1 32884001 Domain of unknown function DUF1605; Helicase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 13 110
No external refs found!