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Aliases : HaLaN_29719, GFH30799
Description : rRNA-processing arch domain; ATP-dependent RNA helicase Ski2, C-terminal [Interproscan].
Gene families : OG_01_0000182 (OrthoFinder) Phylogenetic Tree(s): OG0000182_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01005152.1_cds_GFH30799.1_25276 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz08g28230.t1 | No alias | rRNA-processing arch domain; Helicase, C-terminal;... | 0.04 | OrthoFinder | |
| EOD25937 | No alias | Helicase, C-terminal; rRNA-processing arch domain;... | 0.02 | OrthoFinder | |
| EOD31566 | No alias | Helicase, C-terminal; rRNA-processing arch domain;... | 0.02 | OrthoFinder | |
| OT_06G03030.1 | No alias | ATP-dependent RNA helicase Ski2, C-terminal; Helicase,... | 0.02 | OrthoFinder | |
| PTI_28G01510.1 | No alias | ATP-dependent RNA helicase Ski2, C-terminal; Helicase,... | 0.03 | OrthoFinder | |
| Vocar.0063s0039.1 | 32883464 | DEAD/DEAH box helicase domain; ATP-dependent RNA... | 0.02 | OrthoFinder | |
| XM_002500240.1 | MICPUN_78446, 78446 | Helicase, C-terminal; ATP-dependent RNA helicase Ski2,... | 0.04 | OrthoFinder | |
| lcl|BLLF01003501.1_cds_GFH27512.1_21989 | HaLaN_25843, GFH27512 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|LHPG02000027.1_cds_PRW05917.1_5938 | PRW05917 | Superkiller viralicidic activity 2-like 2 isoform B | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Enrichment |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0030955 | potassium ion binding | IEP | Enrichment |
| MF | GO:0031420 | alkali metal ion binding | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| BP | GO:0046034 | ATP metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| No external refs found! |