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Aliases : HaLaN_29401, GFH30529
Description : Low-CO2 inducible
Gene families : OG_01_0000299 (OrthoFinder) Phylogenetic Tree(s): OG0000299_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01004964.1_cds_GFH30529.1_25006 | |
| Cluster | HCCA: Cluster_189 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000718.34 | tig00000718_g3709.t1 | No description available | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00000851.2 | tig00000851_g4886.t1 | No description available | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00021795.7 | tig00021795_g23525.t1 | No description available | 0.02 | OrthoFinder | |
| Cre04.g222800 | 30791567, LCID | No description available | 0.02 | OrthoFinder | |
| Cre06.g307500 | 30779446, LCIC | No description available | 0.03 | OrthoFinder | |
| Dusal.0033s00020.1 | 33202516 | Limiting CO2-inducible protein B/C, beta carbonyic... | 0.02 | OrthoFinder | |
| Dusal.0190s00023.1 | 33189436 | Limiting CO2-inducible protein B/C, beta carbonyic... | 0.02 | OrthoFinder | |
| EOD14811 | No alias | EF-hand domain; Limiting CO2-inducible protein B/C, beta... | 0.02 | OrthoFinder | |
| OT_08G03760.1 | No alias | Limiting CO2-inducible protein B/C, beta carbonyic... | 0.04 | OrthoFinder | |
| PTI_01G11240.1 | No alias | Limiting CO2-inducible protein B/C, beta carbonyic... | 0.02 | OrthoFinder | |
| Vocar.0004s0387.1 | 32889698 | Limiting CO2-inducible protein B/C, beta carbonyic... | 0.02 | OrthoFinder | |
| Vocar.0030s0054.1 | 32894574 | Limiting CO2-inducible protein B/C, beta carbonyic... | 0.03 | OrthoFinder | |
| lcl|BLLF01000881.1_cds_GFH15669.1_10146 | HaLaN_11938, GFH15669 | LCI420 protein | 0.02 | OrthoFinder | |
| lcl|LHPG02000016.1_cds_PRW33563.1_3375 | PRW33563 | Low-CO2 inducible | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004329 | formate-tetrahydrofolate ligase activity | IEP | Enrichment |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0050661 | NADP binding | IEP | Enrichment |
| MF | GO:0051287 | NAD binding | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR040703 | LCIB/C_CA | 44 | 276 |
| No external refs found! |