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Aliases : HaLaN_28829, GFH30052
Description : RNA recognition motif domain [Interproscan].
Gene families : OG_01_0001774 (OrthoFinder) Phylogenetic Tree(s): OG0001774_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01004680.1_cds_GFH30052.1_24529 | |
| Cluster | HCCA: Cluster_163 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g177200 | 30786992, CRB3 | RNA-binding protein BRN1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cz01g29180.t1 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD09360 | No alias | RNA recognition motif domain; WW domain [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0005507 | copper ion binding | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
| BP | GO:0006740 | NADPH regeneration | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| MF | GO:0050661 | NADP binding | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0055065 | metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055070 | copper ion homeostasis | IEP | Enrichment |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 89 | 138 |
| No external refs found! |