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  5. lcl|BLLF01004584.1_cds_GFH29895.1_24372

lcl|BLLF01004584.1_cds_GFH29895.1_24372 (HaLaN_28641, GFH29895)


Aliases : HaLaN_28641, GFH29895

Description : 40S ribosomal protein S21


Gene families : OG_01_0003705 (OrthoFinder) Phylogenetic Tree(s): OG0003705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01004584.1_cds_GFH29895.1_24372
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cre03.g203450 30787782, RPS21 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Dusal.0001s00040.1 33198798 Ribosomal protein S21e [Interproscan]. 0.02 OrthoFinder
EOD12033 No alias Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
OT_16G01860.1 No alias Ribosomal protein S21e [Interproscan]. 0.04 OrthoFinder
PTI_25G00250.1 No alias Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
Sro6_g004850.1 Contig175.g1990 40S ribosomal protein S21 0.03 OrthoFinder
TP04G05880.1 No alias Ribosomal protein S21e [Interproscan]. 0.01 OrthoFinder
Vocar.0011s0134.1 32895267 Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
XM_002506478.1 MICPUN_109558, 109558 Ribosomal protein S21e [Interproscan]. 0.02 OrthoFinder
XM_003063433.1 MicpuC2_45937, 45937 Ribosomal protein S21e [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60607.1_4698 PRW60607 40S ribosomal S21-2 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
CC GO:0061617 MICOS complex IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 22 97
No external refs found!