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  5. lcl|BLLF01004248.1_cds_GFH29234.1_23711

lcl|BLLF01004248.1_cds_GFH29234.1_23711 (HaLaN_27867, GFH29234)


Aliases : HaLaN_27867, GFH29234

Description : Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domain [Interproscan].


Gene families : OG_01_0000148 (OrthoFinder) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01004248.1_cds_GFH29234.1_23711
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Cre13.g574850 30784638, ERM6 CSC1-like protein At1g32090 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0252s00020.1 33187323 10TM putative phosphate transporter, cytosolic domain;... 0.02 OrthoFinder
Dusal.0787s00001.1 33190016 Calcium permeable stress-gated cation channel 1,... 0.02 OrthoFinder
Transcript_contig_1168 1168 Calcium-dependent channel, 7TM region, putative... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR032880 Csc1_N 30 184
No external refs found!