lcl|BLLF01004200.1_cds_GFH29138.1_23615 (HaLaN_27748, GFH29138)


Aliases : HaLaN_27748, GFH29138

Description : 30S ribosomal protein S1


Gene families : OG_01_0001299 (OrthoFinder) Phylogenetic Tree(s): OG0001299_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01004200.1_cds_GFH29138.1_23615
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01001071.1_cds_GFH16924.1_11401 HaLaN_13445, GFH16924 30S ribosomal protein S1 0.03 OrthoFinder
lcl|BLLF01001248.1_cds_GFH18103.1_12580 HaLaN_14847, GFH18103 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01003152.1_cds_GFH26513.1_20990 HaLaN_24677, GFH26513 S1 domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01003912.1_cds_GFH28520.1_22997 HaLaN_27025, GFH28520 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01004200.1_cds_GFH29137.1_23614 HaLaN_27747, GFH29137 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!