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  5. lcl|BLLF01004147.1_cds_GFH29023.1_23500

lcl|BLLF01004147.1_cds_GFH29023.1_23500 (HaLaN_27612, GFH29023)


Aliases : HaLaN_27612, GFH29023

Description : DEAD-box ATP-dependent RNA helicase 29


Gene families : OG_01_0002520 (OrthoFinder) Phylogenetic Tree(s): OG0002520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01004147.1_cds_GFH29023.1_23500
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
Cz05g10330.t1 No alias Helicase, C-terminal; DBP10, C-terminal; DEAD/DEAH box... 0.01 OrthoFinder
OT_06G03920.1 No alias Helicase, C-terminal; DBP10, C-terminal; DEAD/DEAH box... 0.01 OrthoFinder
XM_003057837.1 MicpuC2_16058, 16058 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33126.1_3489 PRW33126 DEAD-box ATP-dependent RNA helicase 29 isoform X1 isoform A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 50 123
No external refs found!