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  5. lcl|BLLF01004075.1_cds_GFH28868.1_23345

lcl|BLLF01004075.1_cds_GFH28868.1_23345 (HaLaN_27428, GFH28868)


Aliases : HaLaN_27428, GFH28868

Description : ShKT domain; Oxoglutarate/iron-dependent dioxygenase [Interproscan].


Gene families : OG_01_0000009 (OrthoFinder) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01004075.1_cds_GFH28868.1_23345
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cre02.g081600 30785485 Protein modification.hydroxylation.prolyl hydroxylase 0.02 OrthoFinder
Cre03.g160200 30787477 Protein modification.hydroxylation.prolyl hydroxylase 0.05 OrthoFinder
Dusal.1420s00001.1 33188574 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
Sro1062_g236920.1 Contig721.g8298 Prolyl 4-hydroxylase subunit alpha-1 0.02 OrthoFinder
Sro359_g126020.1 Contig295.g3863 Probable prolyl 4-hydroxylase 0.01 OrthoFinder
Sro388_g132430.1 Contig4393.g33017 Probable prolyl 4-hydroxylase 0.02 OrthoFinder
Sro61_g035060.1 Contig3112.g24759 Probable prolyl 4-hydroxylase 0.02 OrthoFinder
TP06G06430.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54185 54185 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
XM_003056115.1 MicpuC2_55701, 55701 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 162 278
IPR003582 ShKT_dom 297 331
No external refs found!