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  5. lcl|BLLF01003940.1_cds_GFH28580.1_23057

lcl|BLLF01003940.1_cds_GFH28580.1_23057 (HaLaN_27092, GFH28580)


Aliases : HaLaN_27092, GFH28580

Description : Hypothetical protein


Gene families : OG_01_0000308 (OrthoFinder) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003940.1_cds_GFH28580.1_23057
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000071.1_cds_GFH07049.1_1526 HaLaN_01793, GFH07049 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000436.1_cds_GFH11794.1_6271 HaLaN_07350, GFH11794 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000691.1_cds_GFH14142.1_8619 HaLaN_10139, GFH14142 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001606.1_cds_GFH20270.1_14747 HaLaN_17362, GFH20270 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01002116.1_cds_GFH22755.1_17232 HaLaN_20267, GFH22755 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01003671.1_cds_GFH27918.1_22395 HaLaN_26311, GFH27918 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!