lcl|BLLF01003811.1_cds_GFH28271.1_22748 (HaLaN_26740, GFH28271)

Aliases : HaLaN_26740, GFH28271

Description : Ribosomal protein L3

Gene families : OG_01_0002780 (OrthoFinder) Phylogenetic Tree(s): OG0002780_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01003811.1_cds_GFH28271.1_22748
Cluster	HCCA: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000025.50	tig00000025_g7954.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder
Cre10.g417700	30789966, RPL3	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder
Cz12g24070.t1	No alias	Ribosomal protein L3 [Interproscan].	0.03	OrthoFinder
Dusal.0375s00002.1	33193949	Ribosomal protein L3 [Interproscan].	0.02	OrthoFinder
OT_01G00490.1	No alias	Ribosomal protein L3 [Interproscan].	0.04	OrthoFinder
PTI_11G03220.1	No alias	Ribosomal protein L3 [Interproscan].	0.05	OrthoFinder
Sro49_g028920.1	Contig2054.g17642	60S ribosomal protein L3	0.06	OrthoFinder
Sro691_g187740.1	Contig1133.g10869	60S ribosomal protein L3	0.06	OrthoFinder
TP07G02750.1	No alias	Ribosomal protein L3 [Interproscan].	0.06	OrthoFinder
Vocar.0016s0012.1	32897929	Ribosomal protein L3 [Interproscan].	0.03	OrthoFinder
XM_002507702.1	MICPUN_89851, 89851	Ribosomal protein L3	0.05	OrthoFinder
lcl\|LHPG02000012.1_cds_PRW44927.1_1937	PRW44927	60S ribosomal L3	0.03	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495890.1_1888	KAA8495890	60S ribosomal protein L3	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004180	carboxypeptidase activity	IEP	Enrichment
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Enrichment
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Enrichment
CC	GO:0005741	mitochondrial outer membrane	IEP	Enrichment
CC	GO:0005839	proteasome core complex	IEP	Enrichment
BP	GO:0006486	protein glycosylation	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Enrichment
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Enrichment
BP	GO:0006790	sulfur compound metabolic process	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008235	metalloexopeptidase activity	IEP	Enrichment
MF	GO:0008237	metallopeptidase activity	IEP	Enrichment
MF	GO:0008238	exopeptidase activity	IEP	Enrichment
MF	GO:0008417	fucosyltransferase activity	IEP	Enrichment
BP	GO:0009057	macromolecule catabolic process	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
CC	GO:0031090	organelle membrane	IEP	Enrichment
CC	GO:0031966	mitochondrial membrane	IEP	Enrichment
CC	GO:0031968	organelle outer membrane	IEP	Enrichment
BP	GO:0043413	macromolecule glycosylation	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Enrichment
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Enrichment
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Enrichment
MF	GO:0070003	threonine-type peptidase activity	IEP	Enrichment
BP	GO:0070085	glycosylation	IEP	Enrichment
CC	GO:0098588	bounding membrane of organelle	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000597	Ribosomal_L3	1	367

External Links

No external refs found!

lcl|BLLF01003811.1_cds_GFH28271.1_22748 (HaLaN_26740, GFH28271)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation