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  5. lcl|BLLF01003803.1_cds_GFH28255.1_22732

lcl|BLLF01003803.1_cds_GFH28255.1_22732 (HaLaN_26721, GFH28255)


Aliases : HaLaN_26721, GFH28255

Description : WD_REPEATS_REGION domain-containing protein


Gene families : OG_01_0004800 (OrthoFinder) Phylogenetic Tree(s): OG0004800_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003803.1_cds_GFH28255.1_22732
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000865.33 tig00000865_g5083.t1 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder
Cre02.g115250 30785377, POC1 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder
Cz06g00050.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 137 170
IPR001680 WD40_repeat 94 127
IPR001680 WD40_repeat 217 251
IPR001680 WD40_repeat 54 85
IPR001680 WD40_repeat 175 212
IPR001680 WD40_repeat 9 44
No external refs found!