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  5. lcl|BLLF01003731.1_cds_GFH28074.1_22551

lcl|BLLF01003731.1_cds_GFH28074.1_22551 (HaLaN_26495, GFH28074)


Aliases : HaLaN_26495, GFH28074

Description : Copine-3 isoform X1


Gene families : OG_01_0000243 (OrthoFinder) Phylogenetic Tree(s): OG0000243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003731.1_cds_GFH28074.1_22551
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001264.8 tig00001264_g7864.t1 Protein BONZAI 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00020614.22 tig00020614_g12133.t1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder
SymbC1.scaffold2662.4 2662.4 C2 domain; Copine [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR010734 Copine_C 16 145
No external refs found!