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  5. lcl|BLLF01003714.1_cds_GFH28029.1_22506

lcl|BLLF01003714.1_cds_GFH28029.1_22506 (HaLaN_26442, GFH28029)


Aliases : HaLaN_26442, GFH28029

Description : 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase


Gene families : OG_01_0001970 (OrthoFinder) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003714.1_cds_GFH28029.1_22506
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre12.g490350 30792879, HDS1 Secondary metabolism.terpenoids.methylerythritol... 0.01 OrthoFinder
Cz13g08020.t1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.04 OrthoFinder
OT_09G00940.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
PTI_05G03380.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.01 OrthoFinder
TP08G03920.1 No alias 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
Transcript_contig_54541 54541 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498959.1_7912 KAA8498959 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR004588 IspG_bac-typ 97 738
No external refs found!