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  5. lcl|BLLF01003345.1_cds_GFH27088.1_21565

lcl|BLLF01003345.1_cds_GFH27088.1_21565 (HaLaN_25351, GFH27088)


Aliases : HaLaN_25351, GFH27088

Description : Histone H2A


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003345.1_cds_GFH27088.1_21565
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001085.4 tig00001085_g6945.t1 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Sro120_g058300.1 Contig2411.g19708 H2A.z 0.02 OrthoFinder
SymbC1.scaffold415.10 415.10 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
TP05G07700.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 27 93
IPR032454 Histone_H2A_C 96 122
No external refs found!