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  5. Cpa|evm.model.tig00021579.19

Cpa|evm.model.tig00021579.19 (tig00021579_g22443.t1)


Aliases : tig00021579_g22443.t1

Description : Cryptochrome-1 OS=Arabidopsis thaliana


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021579.19
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre01.g030650 30789664 Cryptochrome DASH, chloroplastic/mitochondrial... 0.04 OrthoFinder
Cre02.g078939 30785814 Cryptochrome DASH, chloroplastic/mitochondrial... 0.04 OrthoFinder
Cz09g17160.t1 No alias DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
Dusal.0203s00017.1 33199258 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
EOD04007 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.01 OrthoFinder
EOD11134 No alias Putative Cry-DASH cryptochrome [Ensembl]. 0.03 OrthoFinder
EOD15451 No alias Putative Cry-DASH cryptochrome [Ensembl]. 0.03 OrthoFinder
EOD19626 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
EOD24687 No alias Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. 0.02 OrthoFinder
EOD31738 No alias Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. 0.03 OrthoFinder
OT_15G01070.1 No alias DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
PTI_05G04390.1 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
Sro2726_g335660.1 Contig3579.g27670 Cryptochrome DASH 0.03 OrthoFinder
Sro580_g170080.1 Contig2039.g17523 Deoxyribodipyrimidine photo-lyase 0.02 OrthoFinder
Transcript_contig_56266 56266 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.01 OrthoFinder
Vocar.0004s0450.1 32889785 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.03 OrthoFinder
XM_002508739.1 MICPUN_61974, 61974 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
XM_003061182.1 MicpuC2_19486, 19486 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
lcl|BLLF01000049.1_cds_GFH06657.1_1134 HaLaN_01325, GFH06657 Photolyase/cryptochrome alpha/beta domain-containing protein 0.01 OrthoFinder
lcl|BLLF01001067.1_cds_GFH16890.1_11367 HaLaN_13407, GFH16890 Deoxyribodipyrimidine photo-lyase 0.02 OrthoFinder
lcl|BLLF01001533.1_cds_GFH19868.1_14345 HaLaN_16893, GFH19868 Photolyase/cryptochrome alpha/beta domain-containing protein 0.02 OrthoFinder
lcl|BLLF01001533.1_cds_GFH19869.1_14346 HaLaN_16894, GFH19869 Photolyase/cryptochrome alpha/beta domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58644.1_8078 PRW58644 Blue-light photoreceptor 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 312 431
IPR006050 DNA_photolyase_N 70 166
No external refs found!