Aliases : HaLaN_25057, GFH26839
Description : Bacterial extracellular solute-binding protein [Interproscan].
Gene families : OG_01_0000626 (OrthoFinder) Phylogenetic Tree(s): OG0000626_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01003258.1_cds_GFH26839.1_21316 | |
Cluster | HCCA: Cluster_122 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|BLLF01000248.1_cds_GFH09614.1_4091 | HaLaN_04791, GFH09614 | Carbohydrate ABC transporter substrate-binding protein,... | 0.04 | OrthoFinder | |
lcl|BLLF01000299.1_cds_GFH10247.1_4724 | HaLaN_05527, GFH10247 | Guanylate cyclase domain-containing protein | 0.04 | OrthoFinder | |
lcl|BLLF01000570.1_cds_GFH13063.1_7540 | HaLaN_08868, GFH13063 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|BLLF01001131.1_cds_GFH17328.1_11805 | HaLaN_13939, GFH17328 | Hypothetical protein | 0.01 | OrthoFinder | |
lcl|BLLF01001767.1_cds_GFH21130.1_15607 | HaLaN_18371, GFH21130 | Hypothetical protein | 0.02 | OrthoFinder | |
lcl|BLLF01001767.1_cds_GFH21131.1_15608 | HaLaN_18372, GFH21131 | Guanylyl and adenylyl cyclase family member | 0.03 | OrthoFinder | |
lcl|BLLF01002114.1_cds_GFH22744.1_17221 | HaLaN_20256, GFH22744 | Guanylate cyclase domain-containing protein | 0.02 | OrthoFinder | |
lcl|BLLF01005186.1_cds_GFH30849.1_25326 | HaLaN_29777, GFH30849 | Bacterial extracellular solute-binding protein [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006298 | mismatch repair | IEP | Enrichment |
BP | GO:0006811 | ion transport | IEP | Enrichment |
BP | GO:0006812 | cation transport | IEP | Enrichment |
BP | GO:0006950 | response to stress | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0050896 | response to stimulus | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006059 | SBP | 12 | 155 |
No external refs found! |