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  5. lcl|BLLF01003084.1_cds_GFH26294.1_20771

lcl|BLLF01003084.1_cds_GFH26294.1_20771 (HaLaN_24421, GFH26294)


Aliases : HaLaN_24421, GFH26294

Description : Ribosomal protein S17e [Interproscan].


Gene families : OG_01_0002798 (OrthoFinder) Phylogenetic Tree(s): OG0002798_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|BLLF01003084.1_cds_GFH26294.1_20771
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498250 30793608, RPS17 Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder
Cz02g24100.t1 No alias Ribosomal protein S17e [Interproscan]. 0.05 OrthoFinder
Dusal.0462s00007.1 33197488 Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
EOD21818 No alias Ribosomal protein S17e [Interproscan]. 0.01 OrthoFinder
OT_04G05050.1 No alias Ribosomal protein S17e [Interproscan]. 0.09 OrthoFinder
PTI_05G01130.1 No alias Ribosomal protein S17e [Interproscan]. 0.08 OrthoFinder
Sro13_g009690.1 Contig337.g4510 40S ribosomal protein S17 0.11 OrthoFinder
SymbC1.scaffold3580.6 3580.6 Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold3580.7 3580.7 Ribosomal protein S17e [Interproscan]. 0.04 OrthoFinder
TP16G00420.1 No alias Ribosomal protein S17e [Interproscan]. 0.09 OrthoFinder
Transcript_contig_80128 80128 Ribosomal protein S17e [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0265.1 32893973 Ribosomal protein S17e [Interproscan]. 0.07 OrthoFinder
XM_002504075.1 MICPUN_76945, 76945 Ribosomal protein S17e [Interproscan]. 0.09 OrthoFinder
XM_003059599.1 MicpuC2_34073, 34073 Ribosomal protein S17e [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56597.1_9573 PRW56597 40S ribosomal S17 isoform A 0.04 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491192.1_5820 KAA8491192 40S ribosomal protein S17 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 64
No external refs found!