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  5. lcl|BLLF01003055.1_cds_GFH26203.1_20680

lcl|BLLF01003055.1_cds_GFH26203.1_20680 (HaLaN_24310, GFH26203)


Aliases : HaLaN_24310, GFH26203

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0001064 (OrthoFinder) Phylogenetic Tree(s): OG0001064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01003055.1_cds_GFH26203.1_20680
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Dusal.0427s00006.1 33194223 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001214.1_cds_GFH17864.1_12341 HaLaN_14579, GFH17864 ELAV like protein 2/3/4 0.03 OrthoFinder
lcl|BLLF01002589.1_cds_GFH24631.1_19108 HaLaN_22460, GFH24631 RNA recognition motif domain [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21078.1_4823 PRW21078 Phosphatase 1 regulatory subunit pprA 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0051751 alpha-1,4-mannosyltransferase activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 25 92
No external refs found!