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  5. lcl|BLLF01002909.1_cds_GFH25752.1_20229

lcl|BLLF01002909.1_cds_GFH25752.1_20229 (HaLaN_23764, GFH25752)


Aliases : HaLaN_23764, GFH25752

Description : NFX1-type zinc finger-containing protein 1


Gene families : OG_01_0000139 (OrthoFinder) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002909.1_cds_GFH25752.1_20229
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1259.1 1259.1 ATPase, AAA-type, core; CAP Gly-rich domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000022.1_cds_GFH06091.1_568 HaLaN_00664, GFH06091 DNA2/NAM7 helicase, AAA domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01002170.1_cds_GFH22994.1_17471 HaLaN_20538, GFH22994 DNA2/NAM7 helicase, AAA domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01002170.1_cds_GFH22998.1_17475 HaLaN_20542, GFH22998 DNA2/NAM7 helicase-like, AAA domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01002405.1_cds_GFH23953.1_18430 HaLaN_21657, GFH23953 DNA2/NAM7 helicase, AAA domain; ATPase, AAA-type, core;... 0.04 OrthoFinder
lcl|BLLF01002405.1_cds_GFH23954.1_18431 HaLaN_21658, GFH23954 DNA2/NAM7 helicase, AAA domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01002909.1_cds_GFH25754.1_20231 HaLaN_23766, GFH25754 DNA2/NAM7 helicase, AAA domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01005085.1_cds_GFH30709.1_25186 HaLaN_29608, GFH30709 DNA2/NAM7 helicase, AAA domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 98 325
IPR041677 DNA2/NAM7_AAA_11 2 84
IPR041627 AAA_lid_6 1072 1124
IPR003959 ATPase_AAA_core 1183 1289
IPR003959 ATPase_AAA_core 909 1034
IPR003959 ATPase_AAA_core 1439 1542
No external refs found!