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  5. lcl|BLLF01002860.1_cds_GFH25599.1_20076

lcl|BLLF01002860.1_cds_GFH25599.1_20076 (HaLaN_23587, GFH25599)


Aliases : HaLaN_23587, GFH25599

Description : Ribosomal protein S18


Gene families : OG_01_0002223 (OrthoFinder) Phylogenetic Tree(s): OG0002223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002860.1_cds_GFH25599.1_20076
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold24401.1 24401.1 Ribosomal protein S13 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0019915 lipid storage IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 15 61
IPR001892 Ribosomal_S13 75 118
No external refs found!