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  5. lcl|BLLF01002657.1_cds_GFH24883.1_19360

lcl|BLLF01002657.1_cds_GFH24883.1_19360 (HaLaN_22754, GFH24883)


Aliases : HaLaN_22754, GFH24883

Description : E3 ubiquitin-ligase


Gene families : OG_01_0000311 (OrthoFinder) Phylogenetic Tree(s): OG0000311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002657.1_cds_GFH24883.1_19360
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Cre02.g112600 30786357 No description available 0.02 OrthoFinder
Cz01g06220.t1 No alias CBS domain [Interproscan]. 0.02 OrthoFinder
Cz16g16260.t1 No alias CBS domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56868 56868 CBS domain [Interproscan]. 0.01 OrthoFinder
XM_003055678.1 MicpuC2_50698, 50698 CBS domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!