lcl|BLLF01002536.1_cds_GFH24433.1_18910 (HaLaN_22229, GFH24433)

Aliases : HaLaN_22229, GFH24433

Description : U6 small ribonucleoprotein F

Gene families : OG_01_0001195 (OrthoFinder) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01002536.1_cds_GFH24433.1_18910
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
Cre05.g241300	30783199	RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm...	0.02	OrthoFinder
Vocar.0003s0369.1	32889312	LSM domain, eukaryotic/archaea-type [Interproscan].	0.02	OrthoFinder
XM_002502692.1	MICPUN_59039, 59039	LSM domain, eukaryotic/archaea-type [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006405	RNA export from nucleus	IEP	Enrichment
BP	GO:0006406	mRNA export from nucleus	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
BP	GO:0006913	nucleocytoplasmic transport	IEP	Enrichment
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
CC	GO:0016272	prefoldin complex	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
BP	GO:0043248	proteasome assembly	IEP	Enrichment
BP	GO:0050657	nucleic acid transport	IEP	Enrichment
BP	GO:0050658	RNA transport	IEP	Enrichment
BP	GO:0051028	mRNA transport	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment
BP	GO:0051168	nuclear export	IEP	Enrichment
BP	GO:0051169	nuclear transport	IEP	Enrichment
BP	GO:0051236	establishment of RNA localization	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001163	LSM_dom_euk/arc	21	80

External Links

No external refs found!