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  5. Cpa|evm.model.tig00000178.29

Cpa|evm.model.tig00000178.29 (tig00000178_g12738.t1)


Aliases : tig00000178_g12738.t1

Description : Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase


Gene families : OG_01_0001628 (OrthoFinder) Phylogenetic Tree(s): OG0001628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000178.29
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cz11g17130.t1 No alias Aminotransferase class V domain [Interproscan]. 0.05 OrthoFinder
Transcript_contig_54147 54147 Aminotransferase class V domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0284.1 32885778 Aminotransferase class V domain [Interproscan]. 0.03 OrthoFinder
Vocar.0024s0165.1 32890467 Aminotransferase class V domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01004042.1_cds_GFH28799.1_23276 HaLaN_27350, GFH28799 Aminotran_5 domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60237.1_4593 PRW60237 Serine-glyoxylate aminotransferase isoform B 0.08 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60716.1_4598 PRW60716 Alanine-glyoxylate transaminase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000192 Aminotrans_V_dom 53 380
No external refs found!