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  5. lcl|BLLF01002489.1_cds_GFH24275.1_18752

lcl|BLLF01002489.1_cds_GFH24275.1_18752 (HaLaN_22038, GFH24275)


Aliases : HaLaN_22038, GFH24275

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002489.1_cds_GFH24275.1_18752
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.121 tig00000113_g5702.t1 Calmodulin OS=Chlamydomonas reinhardtii 0.01 OrthoFinder
Cre03.g150300 30787530 Calmodulin-3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cz14g12250.t1 No alias EF-hand domain pair; EF-hand domain [Interproscan]. 0.01 OrthoFinder
EOD27565 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
Sro2763_g336500.1 Contig1113.g10703 Myosin light chain 1/3, skeletal muscle isoform 0.01 OrthoFinder
SymbC1.scaffold2133.2 2133.2 EF-hand domain pair [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2372.3 2372.3 EF-hand domain [Interproscan]. 0.01 OrthoFinder
Vocar.0015s0348.1 32899204 EF-hand domain [Interproscan]. 0.01 OrthoFinder
Vocar.0019s0206.1 32892735 EF-hand domain [Interproscan]. 0.04 OrthoFinder
XM_003055480.1 MicpuC2_11510, 11510 EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_003056806.1 MicpuC2_49514, 49514 Caltractin 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0005200 structural constituent of cytoskeleton IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 29 91
IPR002048 EF_hand_dom 102 165
No external refs found!