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  5. lcl|BLLF01002429.1_cds_GFH24049.1_18526

lcl|BLLF01002429.1_cds_GFH24049.1_18526 (HaLaN_21765, GFH24049)


Aliases : HaLaN_21765, GFH24049

Description : Diaminopimelate epimerase


Gene families : OG_01_0002718 (OrthoFinder) Phylogenetic Tree(s): OG0002718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002429.1_cds_GFH24049.1_18526
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Sro1976_g308880.1 Contig727.g8381 Diaminopimelate epimerase 0.01 OrthoFinder
XM_002503145.1 MICPUN_59246, 59246 Diaminopimelate epimerase, DapF [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21029.1_4834 PRW21029 Diaminopimelate chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008837 diaminopimelate epimerase activity IEA Interproscan
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR001653 DAP_epimerase_DapF 1 116
No external refs found!