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  5. lcl|BLLF01002367.1_cds_GFH23805.1_18282

lcl|BLLF01002367.1_cds_GFH23805.1_18282 (HaLaN_21486, GFH23805)


Aliases : HaLaN_21486, GFH23805

Description : AP complex subunit sigma


Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002367.1_cds_GFH23805.1_18282
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001003.32 tig00001003_g6287.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder
EOD06805 No alias Aps1, sigma subunit of the adaptin 1 complex [Ensembl]. 0.02 OrthoFinder
PTI_18G01760.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.01 OrthoFinder
Sro9_g007570.1 Contig4120.g31525 AP-1 complex subunit sigma 0.01 OrthoFinder
Vocar.0034s0064.1 32893003 AP complex, mu/sigma subunit [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 72
No external refs found!