lcl|BLLF01002318.1_cds_GFH23629.1_18106 (HaLaN_21269, GFH23629)

Aliases : HaLaN_21269, GFH23629

Description : DNA glycosylase/AP lyase, H2TH DNA-binding [Interproscan].

Gene families : OG_01_0001953 (OrthoFinder) Phylogenetic Tree(s): OG0001953_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|BLLF01002318.1_cds_GFH23629.1_18106
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cre08.g376500 30774031 DNA damage response.DNA repair mechanisms.base excision... 0.02 OrthoFinder
EOD20250 No alias Putative formamidopyrimidine-DNA glycosylase [Ensembl]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003713 transcription coactivator activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR015886 DNA_glyclase/AP_lyase_DNA-bd 18 68
No external refs found!