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  5. lcl|BLLF01002314.1_cds_GFH23611.1_18088

lcl|BLLF01002314.1_cds_GFH23611.1_18088 (HaLaN_21247, GFH23611)


Aliases : HaLaN_21247, GFH23611

Description : Zinc finger, C3HC4 type (RING finger); SRA-YDG [Interproscan].


Gene families : OG_01_0004043 (OrthoFinder) Phylogenetic Tree(s): OG0004043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002314.1_cds_GFH23611.1_18088
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Cre03.g163850 30788295 E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz03g08240.t1 No alias SRA-YDG; Zinc finger, C3HC4 RING-type; RING-type... 0.02 OrthoFinder
Vocar.0071s0016.1 32896176 Zinc finger, C3HC4 type (RING finger); SRA-YDG [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
InterPro domains Description Start Stop
IPR003105 SRA_YDG 204 353
No external refs found!