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  5. lcl|BLLF01002302.1_cds_GFH23564.1_18041

lcl|BLLF01002302.1_cds_GFH23564.1_18041 (HaLaN_21192, GFH23564)


Aliases : HaLaN_21192, GFH23564

Description : 60S ribosomal protein L21-1


Gene families : OG_01_0003022 (OrthoFinder) Phylogenetic Tree(s): OG0003022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002302.1_cds_GFH23564.1_18041
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000640.5 tig00000640_g2759.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Cre06.g278135 30779568, RPL21 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz04g01160.t1 No alias Ribosomal protein L21e [Interproscan]. 0.06 OrthoFinder
Dusal.1405s00001.1 33194454 Ribosomal protein L21e [Interproscan]. 0.02 OrthoFinder
OT_16G01800.1 No alias Ribosomal protein L21e [Interproscan]. 0.04 OrthoFinder
PTI_11G01510.1 No alias Ribosomal protein L21e [Interproscan]. 0.1 OrthoFinder
Sro2397_g326060.1 Contig2368.g19493 60S ribosomal protein L21 0.1 OrthoFinder
SymbC1.scaffold5018.4 5018.4 Ribosomal protein L21e [Interproscan]. 0.04 OrthoFinder
TP07G05810.1 No alias Ribosomal protein L21e [Interproscan]. 0.09 OrthoFinder
Vocar.0002s0600.1 32890806 Ribosomal protein L21e [Interproscan]. 0.05 OrthoFinder
XM_002506309.1 MICPUN_95995, 95995 Ribosomal protein L21e [Interproscan]. 0.09 OrthoFinder
XM_003063429.1 MicpuC2_49736, 49736 Ribosomal protein L21e [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57524.1_9173 PRW57524 60S ribosomal L21-1-like 0.04 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499114.1_8067 KAA8499114 60S ribosomal protein L21-A 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 88
No external refs found!