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  5. lcl|BLLF01002295.1_cds_GFH23530.1_18007

lcl|BLLF01002295.1_cds_GFH23530.1_18007 (HaLaN_21153, GFH23530)


Aliases : HaLaN_21153, GFH23530

Description : Ribulose bisphosphate carboxylase/oxygenaseactivase


Gene families : OG_01_0000770 (OrthoFinder) Phylogenetic Tree(s): OG0000770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002295.1_cds_GFH23530.1_18007
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.90 tig00020848_g14621.t1 Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 OrthoFinder
Cpa|evm.model.tig00020848.91 tig00020848_g14621.t1 Ribulose bisphosphate carboxylase/oxygenase activase,... 0.03 OrthoFinder
Cre04.g229300 30791545, RCA1 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 OrthoFinder
Cre17.g718950 30782683, RCA2 Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 OrthoFinder
Dusal.0354s00016.1 33201410 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
OT_04G02530.1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
Transcript_contig_89419 89419 Hypothetical protein 0.03 OrthoFinder
Vocar.0001s1749.1 32884852 ATPase, AAA-type, core [Interproscan]. 0.04 OrthoFinder
Vocar.0004s0119.1 32889477 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
XM_002501464.1 MICPUN_58139, 58139 Ribulose bisphosphate carboxylase/oxygenase... 0.03 OrthoFinder
XM_003057947.1 MicpuC2_32785, 32785 Ribulose bisphosphate carboxylase/oxygenase activase,... 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60797.1_4613 PRW60797 Rubisco activase 0.05 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59108.1_7247 PRW59108 Rubisco activase 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!