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  5. lcl|BLLF01002292.1_cds_GFH23517.1_17994

lcl|BLLF01002292.1_cds_GFH23517.1_17994 (HaLaN_21140, GFH23517)


Aliases : HaLaN_21140, GFH23517

Description : Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002292.1_cds_GFH23517.1_17994
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021318.63 tig00021318_g20183.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD10197 No alias E3 ubiquitin ligase [Ensembl]. 0.01 OrthoFinder
EOD12960 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.01 OrthoFinder
PTI_19G00770.1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
Sro289_g109030.1 Contig4471.g33587 RCC1 and BTB domain-containing protein 2 0.01 OrthoFinder
SymbC1.scaffold3997.3 3997.3 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496422.1_151 KAA8496422 Secretion-regulating guanine nucleotide exchange factor 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 320 348
IPR000408 Reg_chr_condens 274 316
IPR000408 Reg_chr_condens 138 205
IPR000408 Reg_chr_condens 209 263
No external refs found!