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  5. lcl|BLLF01002251.1_cds_GFH23349.1_17826

lcl|BLLF01002251.1_cds_GFH23349.1_17826 (HaLaN_20950, GFH23349)


Aliases : HaLaN_20950, GFH23349

Description : Chlorophyll a-b binding protein, chloroplastic


Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002251.1_cds_GFH23349.1_17826
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre03.g156900 30787808, LHCBM5 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre04.g232104 30791553, LHCBM3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre06.g272650 30779881, LHCA8 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder
Cre06.g278213 30779171, LHCA6 Chlorophyll a-b binding protein P4, chloroplastic... 0.06 OrthoFinder
Cre10.g425900 30790196, LHCA5 Chlorophyll a-b binding protein 4, chloroplastic... 0.06 OrthoFinder
Cre10.g452050 30790835, LHCA4 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.05 OrthoFinder
Cre11.g467573 30776039, LHCA3 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder
Cre12.g508750 30791684, LHCA2 Photosystem I chlorophyll a/b-binding protein 6,... 0.02 OrthoFinder
Cre16.g673650 30777655, LHCB5 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cre16.g687900 30778224, LHCA7 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.03 OrthoFinder
Cre17.g720250 30782643, LHCB4 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder
Cz01g23030.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz02g14140.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz03g26240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz04g04130.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.09 OrthoFinder
Cz04g09210.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz07g02100.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz08g11160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz09g32070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz10g10160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz12g16070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz13g03240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz15g09060.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz15g17110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz16g14150.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Dusal.0008s00007.1 33198903 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0027s00004.1 33191535 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0048s00039.1 33189457 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0049s00019.1 33200350 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0081s00007.1 33198263 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0125s00005.1 33191827 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Dusal.0152s00006.1 33186191 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0206s00001.1 33187265 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0388s00006.1 33197668 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Dusal.3971s00001.1 33198839 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
OT_01G04980.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_03G04960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_09G04490.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_17G00760.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Sro98_g050410.1 Contig3362.g26333 Chloroplastic 0.01 OrthoFinder
Transcript_contig_59040 59040 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_79146 79146 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_79793 79793 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
UNPLg00080.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0002s0071.1 32890569 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0333.1 32890723 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0005s0361.1 32883819 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0009s0370.1 32893259 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0011s0017.1 32895358 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0016s0243.1 32897935 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0018s0037.1 32898532 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0021s0124.1 32896004 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0023s0180.1 32883354 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0028s0157.1 32895586 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
XM_002499585.1 MICPUN_56050, 56050 Prasinophyte specific chlorophyll a/b-binding protein,... 0.02 OrthoFinder
XM_002507043.1 MICPUN_104693, 104693 Chlorophyll a/b-binding protein, psi-associated,... 0.02 OrthoFinder
XM_002507443.1 MICPUN_54950, 54950 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA2) 0.02 OrthoFinder
XM_003054893.1 MicpuC2_45156, 45156 Prasinophyte specific chlorophyll a/b-binding protein,... 0.04 OrthoFinder
XM_003056380.1 MicpuC2_45265, 45265 Prasinophyte specific chlorophyll a/b-binding protein,... 0.02 OrthoFinder
XM_003056382.1 MicpuC2_70884, 70884 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA2) 0.04 OrthoFinder
XM_003057791.1 MicpuC2_57460, 57460 Prasinophyte specific chlorophyll a/b-binding protein,... 0.03 OrthoFinder
XM_003063603.1 MicpuC2_36592, 36592 Chlorophyll a/b-binding protein CP26, chloroplast... 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61161.1_400 PRW61161 Chlorophyll a b binding CP29 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61582.1_286 PRW61582 Cytochrome b-c1 complex subunit Rieske-mitochondrial 0.04 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60030.1_6172 PRW60030 Chlorophyll a-b binding of LHCII type chloroplastic 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59323.1_7029 PRW59323 Light-harvesting of photosystem I 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57333.1_9090 PRW57333 Chlorophyll a b-binding apo CP26 precursor 0.04 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56118.1_10249 PRW56118 Light harvesting complex a 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0051751 alpha-1,4-mannosyltransferase activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 59 239
No external refs found!