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  5. lcl|BLLF01002248.1_cds_GFH23333.1_17810

lcl|BLLF01002248.1_cds_GFH23333.1_17810 (HaLaN_20932, GFH23333)


Aliases : HaLaN_20932, GFH23333

Description : Hypothetical protein


Gene families : OG_01_0001809 (OrthoFinder) Phylogenetic Tree(s): OG0001809_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002248.1_cds_GFH23333.1_17810
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000137.1 tig00000137_g8129.t1 No description available 0.02 OrthoFinder
Cre10.g461000 30790498 No description available 0.04 OrthoFinder
Cz08g27170.t1 No alias Down-regulated-in-metastasis protein [Interproscan]. 0.05 OrthoFinder
EOD12441 No alias Down-regulated-in-metastasis protein [Interproscan]. 0.03 OrthoFinder
PTI_02G02570.1 No alias Down-regulated-in-metastasis protein [Interproscan]. 0.03 OrthoFinder
Sro215_g088910.1 Contig4439.g33315 Processome component 20 homolog 0.05 OrthoFinder
Vocar.0029s0011.1 32887305 Down-regulated-in-metastasis protein [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58885.1_7285 PRW58885 Small subunit processome component 20-like protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!